Research laboratory

BASMIR Lab

Biomedical AI, Security and Medical Imaging Research.

A research group founded by Dr. Fakhri Alam Khan at KFUPM, bringing together biomedical AI, medical imaging, trustworthy systems, and cybersecurity.

05Research tracks
08PI-led projects
08Selected publications
06Lab members

About BASMIR

BASMIR Lab advances accurate, explainable, and secure computing for biomedical discovery, clinical decision support, retinal screening, and resilient digital infrastructure.

Our work connects biomedical AI with cybersecurity, privacy-preserving learning, multimodal medical imaging, cloud systems, and post-quantum security.

We organize collaborative research around focused tracks while encouraging cross-track projects that move from data and models to validated, useful systems.

Research tracks

Track 1

Retinal AI and Computational Ophthalmology

Retinal imaging, diabetic retinopathy, retinopathy of prematurity, screening, triage, clinical validation, and explainable ophthalmic AI.

Track 2

Medical Imaging and Multimodal Biomedical AI

Medical image understanding, 3D point clouds, multimodal large language models, transformers, and decision support for biomedical applications.

Track 3

Trustworthy and Privacy-Preserving AI

Federated learning, privacy, robustness, explainability, data-efficient learning, and reliable AI for sensitive health data.

Track 4

AI-Driven Cybersecurity and Secure Healthcare Systems

Intrusion detection, malware analysis, blockchain security, secure healthcare infrastructure, and AI for resilient digital systems.

Track 5

Post-Quantum Cryptography and Embedded Systems Security

Post-quantum cryptography, secure boot, side-channel and fault-attack resilience, embedded systems, IoT, and autonomous platforms.

Team members

Founder

Dr. Fakhri Alam Khan

Founder, BASMIR Lab

PhD candidate

Mr. Inam ul Haq

KFUPM

PhD candidate

Ms. Abeer Alshehri

KFUPM

PhD candidate

Ms. Quratulain Arshad

KFUPM

PhD candidate

Mr. Shahid Ali Bakhsh

KFUPM

PhD candidate

Ms. Sarah Alissa

KFUPM

PI-led projects

Active · PI

Enhancing Performance and Attack Resilience of Kyber based Post Quantum Secure Bootloaders against Side-Channel and Fault Attacks in Embedded Systems

IN26098 · DROC, KFUPM · SAR 241,000 · 2026–2028

Active · PI

Deep Learning-based Workflow for Enhanced Bioactivity Prediction of Fungal Compounds

INSS2607 · IRC-ISS, KFUPM · SAR 37,500 · 2026

Active · PI

Deep Learning for Retinopathy of Prematurity: AI-based Detection and Triage of Plus Disease

JRC-AI-KKESH-02 · JRC-AI, SDAIA · SAR 30,000 · 2026–2027

Completed · PI

Provenance-based Intelligent Search Framework for Cloud

SR211008 · DROC, KFUPM · SAR 73,230 · 2022–2023

Completed · PI

Automated Detection of Diabetic Changes in Fundus Photographs

INSS2205 · IRC-ISS, KFUPM · SAR 111,300 · 2022–2024

Completed · PI

Wearable Digital Forensics: A Framework to Identify Digital Evidence and Risk Factors that lead to Aggressive Behavior

INSS2301 · IRC-ISS, KFUPM · SAR 76,700 · 2023–2024

Completed · PI

A Novel Formulation for Rapid and Precise Early-Stage Alzheimer’s Detection Using Deep Learning Models

JRC-AI-RFP-12 · JRC-AI, SDAIA · SAR 120,000 · 2023–2024

Completed · PI

Automated Detection of Diabetic Retinopathy Severity using Self-supervised Learning and Embedded Knowledge Detection

JRC-AI-RG-06 · JRC-AI, SDAIA · SAR 150,000 · 2023–2024

Selected publications

2026

Exploring 3D point clouds with multimodal large language model (MLLM): A review

S Alissa, M Usman and FA Khan · Image and Vision Computing, Volume 175.

DOI: 10.1016/j.imavis.2026.106202 ↗
2025

Multi scale self supervised learning for deep knowledge transfer in diabetic retinopathy grading

Scientific Reports · JIF 4.9 · Q1.

View publication ↗
2023

Diabetic retinopathy grading review: Current techniques and future directions

Image and Vision Computing · JIF 5.0 · Q1.

View publication ↗
2026

Leveraging Multimodal LLMs and Metaverse Technologies for Early Diagnosis of Elderly Diseases

IEEE Transactions on Computational Social Systems · JIF 4.6 · Q1.

View publication ↗
2025

Balancing privacy and performance in healthcare: A federated learning framework for sensitive data

Digital Health · JIF 3.9 · Q1.

View publication ↗
2026

Towards Practical Migration to Post Quantum SSH: System-Level Design and Evaluation

SA Baksh, IU Haq, T Helmy, FA Khan et al. · Frontiers in Computer Science, Volume 8 · JIF 3.4 · Q3.

DOI: 10.3389/fcomp.2026.1844445 ↗
2025

Explainable Disease Classification: Exploring Grad-CAM Analysis of CNNs and ViTs

Journal of Advances in Information Technology · Q4 / ESCI.

View publication ↗
2020

Static malware detection and attribution in android Byte-code through an end-to-end deep system

Future Generation Computer Systems · JIF 5.9 · Q1.

View publication ↗

Research opportunities

Join BASMIR Lab.

We are actively looking for postdoctoral researchers and PhD candidates working in biomedical AI, medical imaging, cybersecurity, trustworthy and privacy-preserving AI, or post-quantum security.

If your research interests align with BASMIR Lab, please contact us with a brief research profile, CV, and selected publications.

Contact the lab